Technical Articles

2025

  1. peptune-article.png
    Unlocking the Future of Peptide-Based Precision Medicine
    Jan 2025
    A 15-minute summary of our paper, "PepTune: De Novo Generation of Therapeutic Peptides with Multi-Objective-Guided Discrete Diffusion"
    Article

2024

  1. rosetta.jpeg
    A Complete Guide to Protein Folding
    Oct 2024
    A 3-hour breakdown of the three-track RoseTTAFold protein prediction model that leverages multi-modal deep learning architectures to transform single sequences into dynamic 3D structures.
    Article
  2. se(3).jpeg
    A Complete Guide to Spherical Equivariant Graph Transformers
    Aug 2024
    A 2.5-hour breakdown of the theory behind spherical equivariant (SE(3)) graph neural networks (EGNNs) and the SE(3)-Transformer architecture.
    Article
  3. moltrans.jpeg
    MolTrans: Transformers for Drug-Target Interaction Prediction
    Jul 2024
    Comprehensive, visual breakdown of the MolTrans model and Transformer encoders for drug-target interaction (DTI) prediction.
    Article